Conserved Motifs and Prediction of Regulatory Modules in Caenorhabditis elegans

Supplemental Data


1) List of all motifs with brief support information

2) List of motifs that are significant in different analysis

Motifs Similar to Known C. elegans Motifs
Motifs Enriched for Known Transcription Factor Targets
Motifs Similar to TRANSFAC Motifs
Motifs Significant in Location Analysis
Motifs Significant in Microarray Expression Analysis
Motifs Significant in Tissue GFP Expression Enrichment Analysis
Motifs Significant in GO Enrichment Analysis
Motifs Significant in Expression Coherence Analysis

3) Pictures of Experimental Module and Predicted Module in Promoter Region

4) Pictures of Experimental Module and Predicted Module in Intron Region

5) Pictures of Experimental Module and Predicted Module in microRNA Promoter

6) Genes and Associated Motifs

7) Supplemental Table: Experimental Defined Modules and References

8) UCSC Genome Browser view of exemplar sites and predicted cis-regulatory modules

9) Download all matrices

10) Download CERMOD and documentation